Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
HttP42859 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Gm28061-201ENSMUST00000189085 807 ntBASIC7.09□□□□□ -1.27
HttP42859 Gm9480-201ENSMUST00000198038 616 ntBASIC7.09□□□□□ -1.27
HttP42859 Mir219c-201ENSMUST00000199860 60 ntBASIC7.09□□□□□ -1.27
HttP42859 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.09□□□□□ -1.27
HttP42859 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.09□□□□□ -1.27
HttP42859 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HttP42859 AC124709.3-201ENSMUST00000227294 171 ntBASIC7.09□□□□□ -1.27
HttP42859 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HttP42859 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HttP42859 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
HttP42859 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
HttP42859 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.09□□□□□ -1.28
HttP42859 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
HttP42859 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.28
HttP42859 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
HttP42859 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
HttP42859 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.09□□□□□ -1.28
HttP42859 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Gm22820-201ENSMUST00000157205 329 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.08□□□□□ -1.28
HttP42859 Gm37380-201ENSMUST00000193752 397 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm18838-201ENSMUST00000204855 886 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.08□□□□□ -1.28
HttP42859 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.08□□□□□ -1.28
HttP42859 AC107711.2-203ENSMUST00000227827 762 ntBASIC7.08□□□□□ -1.28
HttP42859 AC131178.1-201ENSMUST00000228649 492 ntBASIC7.08□□□□□ -1.28
HttP42859 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.08□□□□□ -1.28
HttP42859 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HttP42859 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Gm38029-201ENSMUST00000192669 2090 ntBASIC7.08□□□□□ -1.28
HttP42859 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Gm2199-201ENSMUST00000119065 874 ntBASIC7.08□□□□□ -1.28
HttP42859 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.08□□□□□ -1.28
HttP42859 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 Mir3085-201ENSMUST00000175493 89 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm24303-201ENSMUST00000178237 126 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm36262-201ENSMUST00000223274 499 ntBASIC7.08□□□□□ -1.28
HttP42859 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.08□□□□□ -1.28
HttP42859 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HttP42859 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HttP42859 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.08□□□□□ -1.28
HttP42859 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm23884-201ENSMUST00000122687 294 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Gm16531-201ENSMUST00000180658 967 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm27006-201ENSMUST00000182218 943 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.07□□□□□ -1.28
HttP42859 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.07□□□□□ -1.28
HttP42859 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm2996-201ENSMUST00000211398 537 ntBASIC7.07□□□□□ -1.28
HttP42859 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 AC153937.1-201ENSMUST00000218734 412 ntBASIC7.07□□□□□ -1.28
HttP42859 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HttP42859 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Mir143-201ENSMUST00000083511 63 ntBASIC7.07□□□□□ -1.28
HttP42859 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HttP42859 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.07□□□□□ -1.28
HttP42859 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Gm24173-201ENSMUST00000104130 128 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms