Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15158-201ENSMUST00000120577 570 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Gm9697-201ENSMUST00000147052 997 ntBASIC6.53□□□□□ -1.36
Sox6P40645 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Gm26729-201ENSMUST00000180744 352 ntBASIC6.53□□□□□ -1.36
Sox6P40645 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Gm44566-201ENSMUST00000207638 304 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Gm6581-201ENSMUST00000214545 260 ntBASIC6.53□□□□□ -1.36
Sox6P40645 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.53□□□□□ -1.36
Sox6P40645 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.53□□□□□ -1.36
Sox6P40645 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Sox6P40645 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.53□□□□□ -1.36
Sox6P40645 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Sox6P40645 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Sox6P40645 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Sox6P40645 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.52□□□□□ -1.37
Sox6P40645 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm22438-201ENSMUST00000104049 132 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm24284-201ENSMUST00000104240 142 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm8624-201ENSMUST00000118083 432 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm11865-201ENSMUST00000118093 859 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm11926-201ENSMUST00000118520 430 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm11320-201ENSMUST00000119434 463 ntBASIC6.52□□□□□ -1.37
Sox6P40645 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm17047-201ENSMUST00000167709 430 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox6P40645 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm27218-201ENSMUST00000183745 392 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Gm18752-201ENSMUST00000192876 608 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm18428-201ENSMUST00000194986 791 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm20690-202ENSMUST00000195126 355 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm38328-201ENSMUST00000195582 317 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm45198-201ENSMUST00000206796 591 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm45319-201ENSMUST00000210220 318 ntBASIC6.52□□□□□ -1.37
Sox6P40645 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox6P40645 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox6P40645 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.52□□□□□ -1.37
Sox6P40645 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.52□□□□□ -1.37
Sox6P40645 AV026068-229ENSMUST00000225516 595 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.52□□□□□ -1.37
Sox6P40645 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.52□□□□□ -1.37
Sox6P40645 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sox6P40645 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox6P40645 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms