Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm12445-201ENSMUST00000117947 885 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm13458-201ENSMUST00000118239 367 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm11850-201ENSMUST00000119679 479 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm12189-201ENSMUST00000119779 912 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm21430-201ENSMUST00000182998 998 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC5.57□□□□□ -1.52
Sdc1P18828 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm44111-201ENSMUST00000204649 399 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm45196-201ENSMUST00000206751 825 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC5.57□□□□□ -1.52
Sdc1P18828 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm5292-201ENSMUST00000073317 580 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Gm17541-201ENSMUST00000080062 525 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.57□□□□□ -1.52
Sdc1P18828 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sdc1P18828 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC5.57□□□□□ -1.52
Sdc1P18828 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 CT025639.1-201ENSMUST00000223906 1375 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Sdc1P18828 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Sdc1P18828 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC5.56□□□□□ -1.52
Sdc1P18828 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm44253-201ENSMUST00000203387 628 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm5027-201ENSMUST00000206700 375 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Gm19324-201ENSMUST00000213229 1169 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm4898-201ENSMUST00000218519 832 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms