Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm12955-201ENSMUST00000119689 957 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm25437-201ENSMUST00000158282 132 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm16112-201ENSMUST00000159075 382 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Cdx1P18111 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm20452-201ENSMUST00000174686 513 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm4308-201ENSMUST00000179735 914 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm9167-201ENSMUST00000182469 962 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm43040-201ENSMUST00000202399 558 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm44979-201ENSMUST00000206218 287 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm45432-201ENSMUST00000210391 416 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm18781-201ENSMUST00000211252 924 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.74□□□□□ -1.49
Cdx1P18111 AC160338.3-201ENSMUST00000214836 384 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.74□□□□□ -1.49
Cdx1P18111 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 AC162183.1-201ENSMUST00000224843 472 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Vmn1r41-204ENSMUST00000227039 985 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cdx1P18111 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm26264-201ENSMUST00000083278 159 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm22053-201ENSMUST00000083394 200 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdx1P18111 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Cdx1P18111 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm7647-201ENSMUST00000200996 1389 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm25593-201ENSMUST00000102272 96 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm12365-201ENSMUST00000117931 568 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC5.73□□□□□ -1.49
Cdx1P18111 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm13726-201ENSMUST00000121278 794 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm11383-201ENSMUST00000121346 807 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm11882-201ENSMUST00000121463 506 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm12517-201ENSMUST00000122082 425 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdx1P18111 Gm27401-201ENSMUST00000184052 173 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Mir8095-201ENSMUST00000185103 129 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm28894-201ENSMUST00000185214 615 ntBASIC5.73□□□□□ -1.49
Cdx1P18111 Gm28573-201ENSMUST00000187821 380 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms