Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Gm8464-201ENSMUST00000140208 2200 ntBASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Gm4750-202ENSMUST00000152262 2200 ntBASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc188F6WEU2 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm13081-201ENSMUST00000121527 5599 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm13333-201ENSMUST00000119424 781 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm15192-201ENSMUST00000121005 293 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm23250-201ENSMUST00000157444 267 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm16139-201ENSMUST00000160015 420 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm9286-201ENSMUST00000173586 508 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm23806-201ENSMUST00000175157 109 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm17965-201ENSMUST00000193904 517 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc188F6WEU2 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm28649-201ENSMUST00000189153 1581 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm14938-201ENSMUST00000119482 943 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm13940-201ENSMUST00000121023 301 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm14126-201ENSMUST00000122345 395 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm26323-201ENSMUST00000157743 175 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Gm20702-201ENSMUST00000176181 460 ntBASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.25□□□□□ -1.25
Ccdc188F6WEU2 Mir6361-201ENSMUST00000185079 101 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms