Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb2S4R1M3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afb2S4R1M3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Gm10849-201ENSMUST00000100397 618 ntBASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb2S4R1M3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb2S4R1M3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.31■□□□□ 0.52
H2afb2S4R1M3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Gm42569-201ENSMUST00000200539 472 ntBASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb2S4R1M3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb2S4R1M3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.28■□□□□ 0.52
H2afb2S4R1M3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb2S4R1M3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb2S4R1M3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb2S4R1M3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb2S4R1M3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms