Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.32■■□□□ 1
Cdc45Q9Z1X9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdc45Q9Z1X9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Gm6365-201ENSMUST00000054711 744 ntBASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.31■■□□□ 1
Cdc45Q9Z1X9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdc45Q9Z1X9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Cdc45Q9Z1X9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Gm12933-201ENSMUST00000120203 872 ntBASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdc45Q9Z1X9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.28■■□□□ 1
Cdc45Q9Z1X9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdc45Q9Z1X9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdc45Q9Z1X9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdc45Q9Z1X9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms