Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.18□□□□□ -0.14
CcsQ9WU84 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Gm43137-201ENSMUST00000198052 594 ntBASIC14.18□□□□□ -0.14
CcsQ9WU84 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.18□□□□□ -0.14
CcsQ9WU84 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CcsQ9WU84 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcsQ9WU84 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CcsQ9WU84 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.17□□□□□ -0.14
CcsQ9WU84 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.17□□□□□ -0.14
CcsQ9WU84 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.17□□□□□ -0.14
CcsQ9WU84 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcsQ9WU84 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcsQ9WU84 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CcsQ9WU84 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.15□□□□□ -0.14
CcsQ9WU84 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CcsQ9WU84 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcsQ9WU84 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms