Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn8aQ9WTU3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn8aQ9WTU3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn8aQ9WTU3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn8aQ9WTU3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scn8aQ9WTU3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Gm18666-201ENSMUST00000190039 958 ntBASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Gm15375-201ENSMUST00000119510 849 ntBASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Scn8aQ9WTU3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn8aQ9WTU3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms