Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.12■□□□□ 0.33
Lhx6Q9R1R0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx6Q9R1R0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx6Q9R1R0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gm9103-201ENSMUST00000119371 405 ntBASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx6Q9R1R0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx6Q9R1R0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.08■□□□□ 0.33
Lhx6Q9R1R0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx6Q9R1R0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx6Q9R1R0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Gm45878-201ENSMUST00000211839 241 ntBASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx6Q9R1R0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx6Q9R1R0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms