Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.54■□□□□ 0.08
Col13a1Q9R1N9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col13a1Q9R1N9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Gm13158-201ENSMUST00000122007 736 ntBASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col13a1Q9R1N9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col13a1Q9R1N9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.52■□□□□ 0.07
Col13a1Q9R1N9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col13a1Q9R1N9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col13a1Q9R1N9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.5■□□□□ 0.07
Col13a1Q9R1N9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col13a1Q9R1N9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col13a1Q9R1N9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col13a1Q9R1N9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms