Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfwd2Q9R1A8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfwd2Q9R1A8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd2Q9R1A8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd2Q9R1A8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd2Q9R1A8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfwd2Q9R1A8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfwd2Q9R1A8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfwd2Q9R1A8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.83■□□□□ 0.6
Rfwd2Q9R1A8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Gm26833-201ENSMUST00000180899 440 ntBASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfwd2Q9R1A8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rfwd2Q9R1A8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfwd2Q9R1A8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms