Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom3Q9QXN0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom3Q9QXN0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.4■□□□□ 0.54
Shroom3Q9QXN0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shroom3Q9QXN0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shroom3Q9QXN0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Gm22325-201ENSMUST00000158904 308 ntBASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shroom3Q9QXN0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shroom3Q9QXN0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shroom3Q9QXN0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shroom3Q9QXN0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.35■□□□□ 0.53
Shroom3Q9QXN0 Rab3c-203ENSMUST00000224180 967 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms