Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh5Q9QUM7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh5Q9QUM7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 CT009738.1-201ENSMUST00000219031 809 ntBASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.64■□□□□ 0.57
Msh5Q9QUM7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Msh5Q9QUM7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Msh5Q9QUM7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm32390-201ENSMUST00000212713 1172 ntBASIC18.61■□□□□ 0.57
Msh5Q9QUM7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Msh5Q9QUM7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.6■□□□□ 0.57
Msh5Q9QUM7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms