Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Scn5aQ9JJV9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn5aQ9JJV9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn5aQ9JJV9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Scn5aQ9JJV9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Scn5aQ9JJV9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scn5aQ9JJV9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn5aQ9JJV9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19■□□□□ 0.63
Scn5aQ9JJV9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn5aQ9JJV9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn5aQ9JJV9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn5aQ9JJV9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.99■□□□□ 0.63
Scn5aQ9JJV9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms