Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1fQ9JIS7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1fQ9JIS7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Gm18032-201ENSMUST00000222541 538 ntBASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cacna1fQ9JIS7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1fQ9JIS7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1fQ9JIS7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cacna1fQ9JIS7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1fQ9JIS7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1fQ9JIS7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1fQ9JIS7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1fQ9JIS7 Gm18959-201ENSMUST00000208954 655 ntBASIC20.91■□□□□ 0.94
Cacna1fQ9JIS7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.91■□□□□ 0.94
Cacna1fQ9JIS7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms