Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Gm22238-201ENSMUST00000175222 88 ntBASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Gm43530-201ENSMUST00000195920 274 ntBASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Rps24-207ENSMUST00000224568 714 ntBASIC17.6■□□□□ 0.41
Ube4bQ9ES00 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4bQ9ES00 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube4bQ9ES00 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4bQ9ES00 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4bQ9ES00 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4bQ9ES00 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Gm14117-201ENSMUST00000122417 843 ntBASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4bQ9ES00 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4bQ9ES00 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms