Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tubb3Q9ERD7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubb3Q9ERD7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubb3Q9ERD7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.16■□□□□ 0.5
Tubb3Q9ERD7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tubb3Q9ERD7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tubb3Q9ERD7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubb3Q9ERD7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tubb3Q9ERD7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.13■□□□□ 0.49
Tubb3Q9ERD7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tubb3Q9ERD7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tubb3Q9ERD7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms