Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Snf8Q9CZ28 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Snf8Q9CZ28 Fst-202ENSMUST00000223640 2612 ntBASIC18.86■□□□□ 0.61
Snf8Q9CZ28 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Snf8Q9CZ28 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Snf8Q9CZ28 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snf8Q9CZ28 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snf8Q9CZ28 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snf8Q9CZ28 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snf8Q9CZ28 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Snf8Q9CZ28 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Gm45417-201ENSMUST00000209533 758 ntBASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.83■□□□□ 0.6
Snf8Q9CZ28 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Gm40848-201ENSMUST00000221998 324 ntBASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Snf8Q9CZ28 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Snf8Q9CZ28 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms