Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Chd1lQ9CXF7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1lQ9CXF7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd1lQ9CXF7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd1lQ9CXF7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Spcs1-204ENSMUST00000226782 949 ntBASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd1lQ9CXF7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd1lQ9CXF7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd1lQ9CXF7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms