Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Gm20760-201ENSMUST00000179197 648 ntBASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.41■□□□□ 0.86
Smc1aQ9CU62 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1aQ9CU62 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.39■□□□□ 0.86
Smc1aQ9CU62 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Gm38205-201ENSMUST00000192243 258 ntBASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1aQ9CU62 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Gm5408-201ENSMUST00000197998 747 ntBASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Gm6365-201ENSMUST00000054711 744 ntBASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1aQ9CU62 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1aQ9CU62 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Gm13148-201ENSMUST00000118892 745 ntBASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1aQ9CU62 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Gm22240-201ENSMUST00000175225 82 ntBASIC20.35■□□□□ 0.85
Smc1aQ9CU62 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms