Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldnd1Q9CQX5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldnd1Q9CQX5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldnd1Q9CQX5 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.83■□□□□ 0.61
Cldnd1Q9CQX5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldnd1Q9CQX5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Gm14859-201ENSMUST00000117752 357 ntBASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldnd1Q9CQX5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Gm9103-201ENSMUST00000119371 405 ntBASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cldnd1Q9CQX5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldnd1Q9CQX5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldnd1Q9CQX5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Gm12085-201ENSMUST00000119263 940 ntBASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldnd1Q9CQX5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldnd1Q9CQX5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms