Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Gm11434-201ENSMUST00000122379 629 ntBASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg3Q9CQV4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg3Q9CQV4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.39■□□□□ 0.54
Retreg3Q9CQV4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg3Q9CQV4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg3Q9CQV4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg3Q9CQV4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg3Q9CQV4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg3Q9CQV4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Gm26524-201ENSMUST00000192339 390 ntBASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Retreg3Q9CQV4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms