Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.12■□□□□ 0.49
Trim33Q99PP7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.12■□□□□ 0.49
Trim33Q99PP7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim33Q99PP7 BC021767-201ENSMUST00000126387 1716 ntBASIC18.12■□□□□ 0.49
Trim33Q99PP7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim33Q99PP7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim33Q99PP7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim33Q99PP7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.09■□□□□ 0.49
Trim33Q99PP7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim33Q99PP7 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.08■□□□□ 0.49
Trim33Q99PP7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim33Q99PP7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim33Q99PP7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim33Q99PP7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim33Q99PP7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim33Q99PP7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim33Q99PP7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.07■□□□□ 0.48
Trim33Q99PP7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Gm6365-201ENSMUST00000054711 744 ntBASIC18.07■□□□□ 0.48
Trim33Q99PP7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim33Q99PP7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms