Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf2ird2Q99NI3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf2ird2Q99NI3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gtf2ird2Q99NI3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf2ird2Q99NI3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Gtf2ird2Q99NI3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gtf2ird2Q99NI3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Gtf2ird2Q99NI3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2ird2Q99NI3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms