Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-1Q99MA9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-1Q99MA9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Gm23634-201ENSMUST00000175071 91 ntBASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-1Q99MA9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx6-1Q99MA9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nkx6-1Q99MA9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-1Q99MA9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-1Q99MA9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Gm18959-201ENSMUST00000208954 655 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms