Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scrt1Q99M85 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scrt1Q99M85 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.03■□□□□ 0.16
Scrt1Q99M85 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.03■□□□□ 0.16
Scrt1Q99M85 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scrt1Q99M85 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.02■□□□□ 0.16
Scrt1Q99M85 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Gm18666-201ENSMUST00000190039 958 ntBASIC16.02■□□□□ 0.16
Scrt1Q99M85 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.02■□□□□ 0.16
Scrt1Q99M85 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Scrt1Q99M85 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scrt1Q99M85 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.01■□□□□ 0.15
Scrt1Q99M85 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Scrt1Q99M85 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Mir1199-201ENSMUST00000117015 119 ntBASIC16.01■□□□□ 0.15
Scrt1Q99M85 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scrt1Q99M85 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Scrt1Q99M85 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Scrt1Q99M85 Gm15378-201ENSMUST00000121894 207 ntBASIC16■□□□□ 0.15
Scrt1Q99M85 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16■□□□□ 0.15
Scrt1Q99M85 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16■□□□□ 0.15
Scrt1Q99M85 Gm44549-201ENSMUST00000208351 577 ntBASIC16■□□□□ 0.15
Scrt1Q99M85 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Scrt1Q99M85 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16■□□□□ 0.15
Scrt1Q99M85 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Scrt1Q99M85 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scrt1Q99M85 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.99■□□□□ 0.15
Scrt1Q99M85 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Scrt1Q99M85 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.99■□□□□ 0.15
Scrt1Q99M85 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.98■□□□□ 0.15
Scrt1Q99M85 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.98■□□□□ 0.15
Scrt1Q99M85 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.98■□□□□ 0.15
Scrt1Q99M85 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms