Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cstf1Q99LC2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cstf1Q99LC2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cstf1Q99LC2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cstf1Q99LC2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.26■□□□□ 0.51
Cstf1Q99LC2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cstf1Q99LC2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Gm7889-201ENSMUST00000185591 958 ntBASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cstf1Q99LC2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cstf1Q99LC2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cstf1Q99LC2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cstf1Q99LC2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms