Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb3Q91XZ7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb3Q91XZ7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb3Q91XZ7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb3Q91XZ7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb3Q91XZ7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb3Q91XZ7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pcdhb3Q91XZ7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb3Q91XZ7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms