Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga11Q91XY8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhga11Q91XY8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Pcdhga11Q91XY8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga11Q91XY8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga11Q91XY8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Gm42642-201ENSMUST00000200683 355 ntBASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga11Q91XY8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga11Q91XY8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Reep4-203ENSMUST00000226563 1444 ntBASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga11Q91XY8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.64■□□□□ 0.42
Pcdhga11Q91XY8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga11Q91XY8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pcdhga11Q91XY8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.42
Pcdhga11Q91XY8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga11Q91XY8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Gm13234-201ENSMUST00000120010 747 ntBASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Gm13534-201ENSMUST00000121169 513 ntBASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga11Q91XY8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga11Q91XY8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms