Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lims2Q91XD2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lims2Q91XD2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lims2Q91XD2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.84■□□□□ 0.61
Lims2Q91XD2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lims2Q91XD2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lims2Q91XD2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Lims2Q91XD2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lims2Q91XD2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims2Q91XD2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.82■□□□□ 0.6
Lims2Q91XD2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims2Q91XD2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.81■□□□□ 0.6
Lims2Q91XD2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims2Q91XD2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lims2Q91XD2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lims2Q91XD2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.79■□□□□ 0.6
Lims2Q91XD2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.79■□□□□ 0.6
Lims2Q91XD2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.79■□□□□ 0.6
Lims2Q91XD2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.79■□□□□ 0.6
Lims2Q91XD2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.79■□□□□ 0.6
Lims2Q91XD2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims2Q91XD2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.78■□□□□ 0.6
Lims2Q91XD2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims2Q91XD2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lims2Q91XD2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lims2Q91XD2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lims2Q91XD2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lims2Q91XD2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Lims2Q91XD2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lims2Q91XD2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms