Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trex1Q91XB0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Trex1Q91XB0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.07■□□□□ 0.96
Trex1Q91XB0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Gm18025-201ENSMUST00000221733 862 ntBASIC21.07■□□□□ 0.96
Trex1Q91XB0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Trex1Q91XB0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.06■□□□□ 0.96
Trex1Q91XB0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Gm42545-201ENSMUST00000202755 922 ntBASIC21.06■□□□□ 0.96
Trex1Q91XB0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trex1Q91XB0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trex1Q91XB0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.04■□□□□ 0.96
Trex1Q91XB0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trex1Q91XB0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.03■□□□□ 0.96
Trex1Q91XB0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Gm5417-201ENSMUST00000079706 384 ntBASIC21.03■□□□□ 0.96
Trex1Q91XB0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.03■□□□□ 0.96
Trex1Q91XB0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trex1Q91XB0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trex1Q91XB0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trex1Q91XB0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Trex1Q91XB0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trex1Q91XB0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.02■□□□□ 0.95
Trex1Q91XB0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Gm37292-201ENSMUST00000192062 758 ntBASIC21.01■□□□□ 0.95
Trex1Q91XB0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trex1Q91XB0 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.01■□□□□ 0.95
Trex1Q91XB0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms