Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
StrcQ8VIM6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Gm28033-201ENSMUST00000184224 96 ntBASIC22.15■■□□□ 1.14
StrcQ8VIM6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
StrcQ8VIM6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
StrcQ8VIM6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
StrcQ8VIM6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
StrcQ8VIM6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
StrcQ8VIM6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
StrcQ8VIM6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Mir5130-201ENSMUST00000175160 84 ntBASIC22.14■■□□□ 1.13
StrcQ8VIM6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
StrcQ8VIM6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
StrcQ8VIM6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
StrcQ8VIM6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
StrcQ8VIM6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.11■■□□□ 1.13
StrcQ8VIM6 Gm17661-201ENSMUST00000170317 270 ntBASIC22.11■■□□□ 1.13
StrcQ8VIM6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
StrcQ8VIM6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
StrcQ8VIM6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
StrcQ8VIM6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
StrcQ8VIM6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Gm7370-201ENSMUST00000219471 767 ntBASIC22.1■■□□□ 1.13
StrcQ8VIM6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Gm22697-201ENSMUST00000175194 63 ntBASIC22.1■■□□□ 1.13
StrcQ8VIM6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
StrcQ8VIM6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22.09■■□□□ 1.13
StrcQ8VIM6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Gm7461-201ENSMUST00000058918 827 ntBASIC22.09■■□□□ 1.13
StrcQ8VIM6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.09■■□□□ 1.13
StrcQ8VIM6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC22.08■■□□□ 1.13
StrcQ8VIM6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.08■■□□□ 1.12
StrcQ8VIM6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms