Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Gm3375-201ENSMUST00000203929 796 ntBASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cspg4Q8VHY0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Gm10138-203ENSMUST00000206952 366 ntBASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg4Q8VHY0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cspg4Q8VHY0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cspg4Q8VHY0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Gm18959-201ENSMUST00000208954 655 ntBASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Gm45058-201ENSMUST00000205810 766 ntBASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Mzt1-203ENSMUST00000227948 952 ntBASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cspg4Q8VHY0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Gm17661-201ENSMUST00000170317 270 ntBASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cspg4Q8VHY0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Cspg4Q8VHY0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms