Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HnrnpuQ8VEK3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
HnrnpuQ8VEK3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.83■■□□□ 1.25
HnrnpuQ8VEK3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HnrnpuQ8VEK3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
HnrnpuQ8VEK3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC22.83■■□□□ 1.24
HnrnpuQ8VEK3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
HnrnpuQ8VEK3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
HnrnpuQ8VEK3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.81■■□□□ 1.24
HnrnpuQ8VEK3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
HnrnpuQ8VEK3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
HnrnpuQ8VEK3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HnrnpuQ8VEK3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Gm15039-201ENSMUST00000118914 875 ntBASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Gm22325-201ENSMUST00000158904 308 ntBASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HnrnpuQ8VEK3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
HnrnpuQ8VEK3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HnrnpuQ8VEK3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Gm6365-201ENSMUST00000054711 744 ntBASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HnrnpuQ8VEK3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
HnrnpuQ8VEK3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms