Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa1Q8VEE4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa1Q8VEE4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa1Q8VEE4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa1Q8VEE4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpa1Q8VEE4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.39■□□□□ 0.54
Rpa1Q8VEE4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa1Q8VEE4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.38■□□□□ 0.53
Rpa1Q8VEE4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa1Q8VEE4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rpa1Q8VEE4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms