Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Gm6576-201ENSMUST00000169678 883 ntBASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Mtag2-201ENSMUST00000058665 714 ntBASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx39aQ8VDW0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Gm15378-201ENSMUST00000121894 207 ntBASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx39aQ8VDW0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx39aQ8VDW0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.33■□□□□ 0.84
Ddx39aQ8VDW0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ddx39aQ8VDW0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ddx39aQ8VDW0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ddx39aQ8VDW0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ddx39aQ8VDW0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx39aQ8VDW0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms