Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rprd1aQ8VDS4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.83■□□□□ 0.61
Rprd1aQ8VDS4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rprd1aQ8VDS4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rprd1aQ8VDS4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.82■□□□□ 0.6
Rprd1aQ8VDS4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rprd1aQ8VDS4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.8■□□□□ 0.6
Rprd1aQ8VDS4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Golph3-205ENSMUST00000228671 2842 ntBASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rprd1aQ8VDS4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rprd1aQ8VDS4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms