Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssx2ipQ8VC66 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 AV356131-201ENSMUST00000206201 750 ntBASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx2ipQ8VC66 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx2ipQ8VC66 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ssx2ipQ8VC66 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx2ipQ8VC66 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssx2ipQ8VC66 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssx2ipQ8VC66 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms