Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.42■■□□□ 1.18
Sf3a1Q8K4Z5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sf3a1Q8K4Z5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sf3a1Q8K4Z5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sf3a1Q8K4Z5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sf3a1Q8K4Z5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Gm5408-201ENSMUST00000197998 747 ntBASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sf3a1Q8K4Z5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Rab3c-203ENSMUST00000224180 967 ntBASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Gm4968-201ENSMUST00000071458 858 ntBASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sf3a1Q8K4Z5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.37■■□□□ 1.17
Sf3a1Q8K4Z5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sf3a1Q8K4Z5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Gm22325-201ENSMUST00000158904 308 ntBASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sf3a1Q8K4Z5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sf3a1Q8K4Z5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Sf3a1Q8K4Z5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sf3a1Q8K4Z5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sf3a1Q8K4Z5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Sf3a1Q8K4Z5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms