Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn1Q8K445 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn1Q8K445 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clrn1Q8K445 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn1Q8K445 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn1Q8K445 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.32■□□□□ 0.36
Clrn1Q8K445 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Gm7291-201ENSMUST00000199147 382 ntBASIC17.32■□□□□ 0.36
Clrn1Q8K445 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.32■□□□□ 0.36
Clrn1Q8K445 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn1Q8K445 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.31■□□□□ 0.36
Clrn1Q8K445 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.31■□□□□ 0.36
Clrn1Q8K445 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.31■□□□□ 0.36
Clrn1Q8K445 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn1Q8K445 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn1Q8K445 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.29■□□□□ 0.36
Clrn1Q8K445 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Gm6365-201ENSMUST00000054711 744 ntBASIC17.29■□□□□ 0.36
Clrn1Q8K445 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn1Q8K445 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clrn1Q8K445 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clrn1Q8K445 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clrn1Q8K445 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.26■□□□□ 0.35
Clrn1Q8K445 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clrn1Q8K445 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms