Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gm13158-201ENSMUST00000122007 736 ntBASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgcll1Q8JZS7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Gm10812-201ENSMUST00000099864 546 ntBASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hmgcll1Q8JZS7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Mtag2-201ENSMUST00000058665 714 ntBASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.9■□□□□ 0.62
Hmgcll1Q8JZS7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgcll1Q8JZS7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.89■□□□□ 0.61
Hmgcll1Q8JZS7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Gm10698-201ENSMUST00000182663 604 ntBASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgcll1Q8JZS7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgcll1Q8JZS7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgcll1Q8JZS7 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgcll1Q8JZS7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms