Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim61Q8JZK6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim61Q8JZK6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim61Q8JZK6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim61Q8JZK6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Mir1199-201ENSMUST00000117015 119 ntBASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim61Q8JZK6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Gm11927-201ENSMUST00000118472 759 ntBASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim61Q8JZK6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim61Q8JZK6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Gm13836-201ENSMUST00000121159 501 ntBASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Gm7977-201ENSMUST00000193787 748 ntBASIC19.21■□□□□ 0.67
Trim61Q8JZK6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim61Q8JZK6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.21■□□□□ 0.67
Trim61Q8JZK6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.21■□□□□ 0.67
Trim61Q8JZK6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim61Q8JZK6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim61Q8JZK6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Gm37055-201ENSMUST00000191866 133 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim61Q8JZK6 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.18■□□□□ 0.66
Trim61Q8JZK6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms