Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopaQ8CIE6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopaQ8CIE6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopaQ8CIE6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopaQ8CIE6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopaQ8CIE6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Gm10653-202ENSMUST00000139570 835 ntBASIC18.65■□□□□ 0.58
CopaQ8CIE6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Gm6211-202ENSMUST00000167849 925 ntBASIC18.65■□□□□ 0.58
CopaQ8CIE6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopaQ8CIE6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.64■□□□□ 0.57
CopaQ8CIE6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.64■□□□□ 0.57
CopaQ8CIE6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.64■□□□□ 0.57
CopaQ8CIE6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopaQ8CIE6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Gm5408-201ENSMUST00000197998 747 ntBASIC18.63■□□□□ 0.57
CopaQ8CIE6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopaQ8CIE6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Gm12527-201ENSMUST00000117967 564 ntBASIC18.62■□□□□ 0.57
CopaQ8CIE6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.62■□□□□ 0.57
CopaQ8CIE6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.62■□□□□ 0.57
CopaQ8CIE6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopaQ8CIE6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.61■□□□□ 0.57
CopaQ8CIE6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopaQ8CIE6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.6■□□□□ 0.57
CopaQ8CIE6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CopaQ8CIE6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms