Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip4Q8CI96 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip4Q8CI96 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip4Q8CI96 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.41■□□□□ 0.54
Clip4Q8CI96 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip4Q8CI96 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.4■□□□□ 0.54
Clip4Q8CI96 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip4Q8CI96 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Clip4Q8CI96 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip4Q8CI96 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip4Q8CI96 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.38■□□□□ 0.53
Clip4Q8CI96 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Gm13534-201ENSMUST00000121169 513 ntBASIC18.38■□□□□ 0.53
Clip4Q8CI96 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip4Q8CI96 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Gm29257-201ENSMUST00000186115 639 ntBASIC18.37■□□□□ 0.53
Clip4Q8CI96 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip4Q8CI96 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip4Q8CI96 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip4Q8CI96 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.35■□□□□ 0.53
Clip4Q8CI96 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.35■□□□□ 0.53
Clip4Q8CI96 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms