Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zc3h3Q8CHP0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zc3h3Q8CHP0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Zc3h3Q8CHP0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Zc3h3Q8CHP0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Zc3h3Q8CHP0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zc3h3Q8CHP0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zc3h3Q8CHP0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zc3h3Q8CHP0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zc3h3Q8CHP0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zc3h3Q8CHP0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Gm18669-201ENSMUST00000216049 778 ntBASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zc3h3Q8CHP0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Zc3h3Q8CHP0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Zc3h3Q8CHP0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Zc3h3Q8CHP0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Gm38027-201ENSMUST00000192315 235 ntBASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms