Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Gm14859-201ENSMUST00000117752 357 ntBASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zswim3Q8CFL8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zswim3Q8CFL8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zswim3Q8CFL8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zswim3Q8CFL8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zswim3Q8CFL8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.14■□□□□ 0.81
Zswim3Q8CFL8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zswim3Q8CFL8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Zswim3Q8CFL8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zswim3Q8CFL8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Gm38285-201ENSMUST00000192928 922 ntBASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zswim3Q8CFL8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zswim3Q8CFL8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Mir6349-201ENSMUST00000184059 97 ntBASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Gm17971-201ENSMUST00000190239 806 ntBASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.09■□□□□ 0.81
Zswim3Q8CFL8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Zswim3Q8CFL8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Zswim3Q8CFL8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.08■□□□□ 0.81
Zswim3Q8CFL8 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.08■□□□□ 0.81
Zswim3Q8CFL8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.08■□□□□ 0.81
Zswim3Q8CFL8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zswim3Q8CFL8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zswim3Q8CFL8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Zswim3Q8CFL8 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.08■□□□□ 0.8
Zswim3Q8CFL8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Zswim3Q8CFL8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zswim3Q8CFL8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Zswim3Q8CFL8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zswim3Q8CFL8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zswim3Q8CFL8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Zswim3Q8CFL8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms