Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Polr2bQ8CFI7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr2bQ8CFI7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr2bQ8CFI7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Polr2bQ8CFI7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Gm27011-201ENSMUST00000182352 972 ntBASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr2bQ8CFI7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2bQ8CFI7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2bQ8CFI7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Polr2bQ8CFI7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.64■□□□□ 0.73
Polr2bQ8CFI7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Gm12527-201ENSMUST00000117967 564 ntBASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Polr2bQ8CFI7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms