Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb7Q8CDY9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb7Q8CDY9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb7Q8CDY9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb7Q8CDY9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Gm5874-201ENSMUST00000096101 508 ntBASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb7Q8CDY9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb7Q8CDY9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb7Q8CDY9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb7Q8CDY9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb7Q8CDY9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms