Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam228aQ8CDW1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Fst-202ENSMUST00000223640 2612 ntBASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fam228aQ8CDW1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam228aQ8CDW1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Mir7075-201ENSMUST00000184187 82 ntBASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam228aQ8CDW1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam228aQ8CDW1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Fam228aQ8CDW1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam228aQ8CDW1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam228aQ8CDW1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms